part_of
has_participant
has_quality
has_role
preceded_by
mode of transmission
end reservoir
factor
Role played by portion of physical substance in a biological process
colonization
the process by which a biotic entity establishes multiple copies of itself in a new environment (including an organismal environment).nnfix idn"native" environment term
biotic
adhesin
seroprevalence
dormancy
quality [state] of an organism that during its life cycle in which its growth. development, metabolism, etc is temporarily suspended nnnsuspended state, non-replicative state, resting state
quality of host
quality of pathogen
susceptibility
can change depending on environmentnnwhere should susceptibility factors go?
resistance
refractoriness
quality of host population
herd immunity
quality of infectious disease
case of infectious disease
incubation period
agent is incubated?ndisease is incubated?
infectivity period
infectious disease progression
the unfolding or course of infectious diseasennwhat do we say about infectious disease that always remain latent nwhat about when a pathogen continues its progression nnwe need to think about whether we need a term called stagenlife cycle?nprogression?ndevelopment?
infectious disease course
host recovery period
intrinsic incubation period
extrinsic incubation period
pathogen life cycle
is this just the part of the life cycle of the biotic entity that has role pathogen for the period of time while it has role pathogen?nncan include phases in the existence of the entity before it becomes a pathogen
dormancy period
pathogen outbreak
oral-fecal transmission
vertical transmission
horizontal transmission
pathogen life cycle stage
infectious disease progression stage
process
role
quality
object
virulence
the degree of pathogenicitynnpathogenicity and virulence are used in some communities as synonyms.
swollen
toxicity
active
contagious
latency
infection has occurred, but it might not have manifested itselfnquality of being in a non replicative statentime to manifest itself na pathogen when it is in a non replicative state
immunosuppressed
exogenous
immunity
protective
temperature
inactivated
mortality
pandemic
prevalence
total number of cases of a particular disease at a given time in a particular population divided by the number of individuals in that particular populationnnthe burden of a disease in a population
epidemic
infected
live
zoonotic
immunocompromised
pathogenicity
the ability of the biotic entity to cause disease in a host of a given typenndo we need to say damage instead of disease?nnpathogenicity and virulence are used as synonyms in some communities
tropism
drug resistance
antibiotic resistance
incidence
number of new cases in a given period of time
invasive
endogenous
attenuated
morbidity
endemic
fusion protein
colonizer
commensal
parasite
symbiant
virulence factor
role played by a portion of substance to promote virulencennmagnitudendegree of pathogenesis
route of entry
invasin
toxin
endotoxin
exotoxin
sign
treatment
symptom
look at mathias's ontology of cancer to get all the subterms...its under quality there
antimicrobial
medicine
therapeutic
vaccine
antibiotic
colonization factor
role played by portion of physical substance which promotes colonization
<new synonym>
adhesion factor
role played by portion of physical substance utilized by an organism in order to establish adherence to a surface in a host
adhesin factor
host
carrier
chronic carrier
reservoir
holding place for a potential pathogen...animate or inanimate
fomite
inanimate holder, is water a fomite or only a reservoir?
mobile genetic element
pathogenicity island
vector
holder and a carrier (actively transmits) and living: potentially make a cross product. every vector comes into contact with the target. (from one host to another?)
pathogen
dependovirus
infectious agent
opportunistic pathogen
emerging pathogen
primary pathogen
prion
initiation of infection
disruption of body surface
disruption of normal microbioflora
pathogen adherence to host cell
create cross products for "host" and "pathogen" that will be part of this process.
nonspecific adherence
specific adherence
afimbrial specific adherence
fimbrial specific adherence
penetration of epithelial barrier
penetration via injury of epithelial barrier
transcytosis
utilization of membranous cell gateway
transmission
the process by which an infectious agent passes from one organism to another organism
pathogenesis
GO:nthe specific processes that generate the ability of an organism to cause disease in anothernnnThis is defined in GO so import.
penetration of host cell
engulfment
fusion with host cell membrane
membrane invagination
passage through cell membrane
engulfment by nonphagocyte
engulfment by phagocyte
damaging host cells and tissues in subepithelial space
induction of damaging host immune response
pathogen-induced apoptosis
pathogen-induced necrosis
virus-induced cytopathogenesis
pathogen spread through host
infectious disease
comment about the instances:nncollections of etiologically connected cases of infectious disease in a given population
pathogen evasion of host immune response
emergence
the process by which an infectious disease establishes itself in a new population (or at a sufficiently higher rate? higher prevalence and/or higher incidence)
epidemiological spread of disease
outbreak
infection
infection treatment process
immunization
prevention of infection
transport by blood
transport by lymph
modulation of inflammatory response
antigenic variation
resist phagocytosis in subepithelial space
serum resistance
phase variation
genetic diversification
complement resistance
epidemic spread of disease
pandemic spread of disease
vaccination
progression rate
rapid progression
long-term non-progression
highly exposed persistently seronegative
<new term>
co-infected
fitness
is a quality relating to both bacteria and host