Ontology Alignment Evaluation Initiative

Bio-ML: A ML-friendly Biomedical track for Equivalence and Subsumption Matching

This track presents an unified evaluation framework suitable for both ML-based and non-ML-based OM systems. The datasets of this track are based on Mondo and the UMLS Metathesaurus.

The 2022 edition involves the following ontologies: OMIM (Online Mendelian Inheritance in Man), ORDO (Orphanet Rare Disease Ontology), NCIT (National Cancer Institute Thesaurus) and DOID (Human Disease Ontology), FMA (Foundational Model of Anatyomy) and SNOMED CT.


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