OXFORD UNIVERSITY  COMPUTING LABORATORY

Jonathan Whiteley - Publications

Peer reviewed journal publications

  1. E.M. Williams, M.C. Sainsbury, L. Sutton, L. Xiong, A.M.S. Black, J.P. Whiteley, D.J. Gavaghan and C.E.W. Hahn. Pulmonary blood flow measured by inspiratory inert gas concentration forcing oscillations. Respiration Physiology, 113, 47-56, 1998.
  2. J.P. Whiteley, D.J. Gavaghan and C.E.W. Hahn. A mathematical evaluation of the multiple breath nitrogen washout technique and the multiple inert gas elimination technique. Journal of Theoretical Biology, 194, 517-539, 1998.
  3. J.P. Whiteley, D.J. Gavaghan and C.E.W. Hahn. A tidal breathing model for the multiple inert gas elimination technique. Journal of Applied Physiology, 87, 161-169, 1999.
  4. J.P. Whiteley, D.J. Gavaghan and C.E.W. Hahn. The effect of the width of the distribution of volume, ventilation and perfusion on arterial blood oxygen content. Journal of Theoretical Biology, 201, 271-279, 1999.
  5. J.P. Whiteley, D.J. Gavaghan and C.E.W. Hahn. The effect of inspired oxygen concentration on the ventilation--perfusion distribution in inhomogeneous lungs. Journal of Theoretical Biology, 204, 575-585, 2000.
  6. J.P. Whiteley, D.J. Gavaghan and C.E.W. Hahn. A tidal breathing model of the inert gas sinewave technique for inhomogeneous lungs. Respiration Physiology, 124: 65-83, 2000.
  7. L. Todorovski, S. Dzeroski, A. Srinivasan, J.P. Whiteley and D.J. Gavaghan. Discovering the structure of partial differential equations from example behaviors. Proceedings of the International Conference on Machine Learning, Stanford, USA, 2000.
  8. J.P. Whiteley, D.J. Gavaghan and C.E.W. Hahn. Modelling inert gas exchange in tissue and mixed--venous blood return to the lungs. Journal of Theoretical Biology, 209, 431-443, 2001.
  9. A.D. Farmery and J.P. Whiteley. A mathematical model of electron transfer within the mitochondrial respiratory cytochromes. Journal of Theoretical Biology, 213, 197-207, 2001.
  10. J.P. Whiteley, D.J. Gavaghan and C.E.W. Hahn. Some factors affecting oxygen uptake by red blood cells in the pulmonary capillaries. Mathematical Biosciences, 169, 153-172, 2001.
  11. J.P. Whiteley, D.J. Gavaghan and C.E.W. Hahn. Variation of venous admixture, SF6 shunt, PaO2 and the PaO2/FIO2 ratio with FIO2. British Journal of Anaesthesia 88, 771-778, 2002.
  12. J.P. Whiteley, M.J. Turner, A.B. Baker, D.J. Gavaghan and C.E.W. Hahn. The effects of ventilation pattern on carbon dioxide transfer in three computer models of the airways. Respiration Physiology & Neurobiology, 131, 269-284, 2002.
  13. J.P. Whiteley, D.J. Gavaghan and C.E.W. Hahn. Mathematical modelling of oxygen transport to tissue. Journal of Mathematical Biology, 44, 503-522, 2002.
  14. J.P. Whiteley, D.J. Gavaghan and C.E.W. Hahn. The effect of diffusion in the respiratory tree on the Alveolar Amplitude Response Technique (AART). Respiration Physiology & Neurobiology, 137, 81-96, 2003.
  15. J.P. Whiteley, A.D. Farmery, D.J. Gavaghan and C.E.W. Hahn. A tidal ventilation model for oxygenation in acute respiratory failure. Respiration Physiology & Neurobiology, 136, 77-88, 2003.
  16. J.P. Whiteley and D.J. Gavaghan. Efficient computations of gas transport in the respiratory tree. Mathematical Medicine & Biology, 20, 91-104, 2003.
  17. J.P. Whiteley, D.J. Gavaghan and C.E.W. Hahn. Mathematical modelling of pulmonary gas transport. Journal of Mathematical Biology, 47, 79-99, 2003.
  18. J.P. Whiteley, D.J. Gavaghan and C.E.W. Hahn. Periodic breathing induced by arterial oxygen partial pressure oscillations. Mathematical Medicine & Biology, 20, 205-224, 2003.
  19. P. Pathmanathan, D.J. Gavaghan, J.P. Whiteley, J.M. Brady, M.P. Nash, P.M.F. Nielsen and V. Rajagopal. Predicting tumour location by simulating large deformations of the breast using a 3D finite element model and nonlinear elasticity. Proceedings of MICCAI 2004, Lecture Notes in Computer Science 3217, 217-224, 2004.
  20. J.P. Whiteley, D.J. Gavaghan and C.E.W. Hahn. Oxygen transport to muscle tissue where regions of low oxygen tension exist. Mathematical and Computer Modelling, 42, 1113-1122, 2005.
  21. J.P.Whiteley. The solution of inverse nonlinear elasticity problems that arise when locating breast tumours. Journal of Theoretical Medicine, 6, 143-149, 2005.
  22. M.J. Bishop, B. Rodriguez, J. Eason, J.P. Whiteley, N. Trayanova and D.J. Gavaghan. Synthesis of voltage--sensitive optical signals: application to panoramic optical mapping. Biophysical Journal, 90, 2938-2945, 2006.
  23. J.P. Whiteley. Some factors affecting pulmonary oxygen transport. Mathematical Biosciences, 202, 115-132, 2006.
  24. J.P. Whiteley. An efficient numerical technique for the solution of the monodomain and bidomain equations. IEEE Transactions on Biomedical Engineering, 53, 2006 (to appear).
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