Computational Biology group Bioinformatics group Respiratory Modelling: Publications
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[1] |
A Geometrical Model for the SNP Motif Identification Problem Gaofeng Huang and Peter Jeavons In Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering‚ BIBE 2007. Pages 395−402. 2007. |
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[2] |
Automatic analysis of agarose gel images Jonathan Flint P. S. Umesh Adiga A. Bhomra M. G. Turri A. Nicod S. R. Datta Peter Jeavons Richard Mott In Bioinformatics. Vol. 17. No. 11. Pages 1084−1089. 2001. |
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[3] |
Characterization of the putative operon containing arylamine N−acetyltransferase (nat) in Mycobacterium bovis BCG E. Sim M. Anderton S. Bhakta G. Besra P. Jeavons L. Eltis In Molecular Microbiology. Vol. 59. No. 1. Pages 181−192. 2006. Details | BibTeX | DOI (10.1111/j.1365-2958.2005.04945.x) | Link |
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[4] |
Chaste: a test−driven approach to software development for biological modelling D.J. Gavaghan J. Pitt−Francis P. Pathmanathan M.O. Bernabeu R. Bordas J. Cooper A.G. Fletcher G.R. Mirams P. Murray J.M. Osborne A. Walter S.J. Chapman A. Garny I.M.M. van Leeuwen P.K. Maini B. Rodriguez S.L. Waters J.P. Whiteley H.M. Byrne In Computer Physics Communications. Vol. 180. No. 12. Pages 2452–2471. 2009. |
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[5] |
Chaste: an open source C++ library for computational physiology and biology G.R. Mirams‚ C.J. Arthurs‚ M.O. Bernabeu‚ R. Bordas‚ J. Cooper‚ A. Corrias‚ Y. Davit‚ S−J. Dunn‚ A.G. Fletcher‚ D.G. Harvey‚ M.E. Marsh‚ J. M. Osborne‚ P. Pathmanathan‚ J. Pitt−Francis‚ J. Southern‚ N. Zemzemi and D.J. Gavaghan In PLoS Computational Biology. Vol. 9. No. 3. Pages e1002970. 2013. Details | BibTeX | DOI (10.1371/journal.pcbi.1002970) | Link |
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[6] |
Enhancing the prediction of transcription factor binding sites by incorporating structural properties and nucleotide covariations Z. Zhang S. Gunewardena P. Jeavons In Journal of Computational Biology. Vol. 13. No. 4. Pages 929−945. 2006. |
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[7] |
Exact and Heuristic Approaches for Identifying Disease−Associated SNP Motifs Gaofeng Huang‚ Peter Jeavons and Dominic Kwiatkowski In Proceedings of 5th Asia−Pacific Bioinformatics Conference‚ APBC 2007. Vol. 5 of Advances in Bioinformatics and Computational Biology. Pages 175−184. Imperial College Press. 2007. |
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[8] |
Finding transcription factor binding sites in DNA Sequences: A template based approach Sumedha Gunewardena and Peter Jeavons No. RR−03−21. Oxford University Computing Laboratory. October, 2003. |
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[9] |
High−throughput functional curation of cellular electrophysiology models Niederer S.A. Cooper J. Mirams G.R. In Progress in Biophysics and Molecular Biology. Vol. 107. Pages 11 − 20. 2011. |
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[10] |
Information categorisation in biological sequence alignments Sumedha Gunewardena and Peter Jeavons No. RR−04−24. Oxford University Computing Laboratory. November, 2004. |
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[11] |
Simulation of multiple ion channel block provides improved early prediction of compounds' clinical torsadogenic risk G. R. Mirams‚ Y. Cui‚ A. Sher‚ M. Fink‚ J. Cooper‚ B. M. Heath‚ N. C. McMahon‚ D. J. Gavaghan and D. Noble In Cardiovascular Research. Vol. 91. No. 1. Pages 53–61. 2011. |