Miguel Bernabeu : Publications
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Chaste: an open source C++ library for computational physiology and biology G.R. Mirams‚ C.J. Arthurs‚ M.O. Bernabeu‚ R. Bordas‚ J. Cooper‚ A. Corrias‚ Y. Davit‚ S−J. Dunn‚ A.G. Fletcher‚ D.G. Harvey‚ M.E. Marsh‚ J. M. Osborne‚ P. Pathmanathan‚ J. Pitt−Francis‚ J. Southern‚ N. Zemzemi and D.J. Gavaghan In PLoS Computational Biology. Vol. 9. No. 3. Pages e1002970. 2013. Details | BibTeX | DOI (10.1371/journal.pcbi.1002970) | Link |
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[2] |
Computational assessment of drug−induced effects on the electrocardiogram: from ion channel block to body surface potentials N Zemzemi‚ MO Bernabeu‚ J Saiz‚ J Cooper‚ P Pathmanathan‚ GR Mirams‚ J Pitt−Francis and B Rodriguez In British Journal of Pharmacology. Vol. 168. No. 3. Pages 718−733. 2013. |
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[3] |
Computational modelling of cardiac electro−physiology: explanation of the variability of results from different numerical solvers P. Pathmanathan‚ M. Bernabeu‚ S. Niederer‚ D. Gavaghan and D. Kay In Int. J. Numerical Methods in Biomedical Engineering. Vol. 28. No. 8. Pages 890−903. 2012. |
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Simulating cardiac electrophysiology using anisotropic mesh adaptivity J Pitt−Francis J Southern GJ Gorman MD Piggott PE Farrell MO Bernabeu In Journal of computational science. No. 1. Pages 82−88. 2010. |
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[5] |
A numerical guide to the solution of the bidomain equations of cardiac electrophysiology P. Pathmanathan‚ M.O. Bernabeu‚ R. Bordas‚ J. Cooper‚ A. Garny‚ J. Pitt−Francis‚ J.P. Whiteley and D.J. Gavaghan In Progress in Biophysics and Molecular Biology. Vol. 102. No. (2−3). Pages 136−155. 2010. |
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[6] |
High−throughput cardiac science on the Grid
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[7] |
Chaste: Incorporating a Novel Multiscale Spatial and Temporal Algorithm into a Large Scale Open Source Library M.O. Bernabeu‚ R. Bordas‚ P. Pathmanathan‚ J. Pitt−Francis‚ J. Cooper‚ A. Garny‚ D.J. Gavaghan‚ B. Rodriguez‚ J.A. Southern and J.P. Whiteley In Phil Trans Roy Soc (A). Vol. 367. No. 1895. Pages 1907−1930. May, 2009. |
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[8] |
Chaste: a test−driven approach to software development for biological modelling D.J. Gavaghan J. Pitt−Francis P. Pathmanathan M.O. Bernabeu R. Bordas J. Cooper A.G. Fletcher G.R. Mirams P. Murray J.M. Osborne A. Walter S.J. Chapman A. Garny I.M.M. van Leeuwen P.K. Maini B. Rodriguez S.L. Waters J.P. Whiteley H.M. Byrne In Computer Physics Communications. Vol. 180. No. 12. Pages 2452–2471. 2009. |
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[9] |
Grid Computing Simulations of Ion Channel Block Effects on the ECG Using 3D Anatomically−Based Models Gavaghan D Bernabeu MO Corrias A Pitt−Francis J Rodriguez B Bethwaite B Enticott C Garic S Peachey T Tan J Abramson D In Computers in Cardiology. 2009. |
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[10] |
Chaste: using agile programming techniques to develop computational biology software J. Pitt−Francis‚ M.O. Bernabeu‚ J. Cooper‚ A. Garny‚ L. Momtahan‚ J. Osborne‚ P. Pathmanathan‚ B. Rodriguez‚ J.P. Whiteley and D.J. Gavaghan In Philosophical Transactions of the Royal Society A: Mathematical‚ Physical and Engineering Sciences. Vol. 366. No. 1878. Pages 3111–3136. 2008. |
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[11] |
High Performance Computer Simulations for the Study of Biological Function in 3D Heart Models Incorporating Fibre Orientation and Realistic Geometry at Para−Cellular Resolution
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