Joe Pitt-Francis : Publications
Journal papers
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[1] |
Grid Computing Simulations of Ion Channel Block Effects on the ECG Using 3D Anatomically−Based Models Gavaghan D Bernabeu MO Corrias A Pitt−Francis J Rodriguez B Bethwaite B Enticott C Garic S Peachey T Tan J Abramson D In Computers in Cardiology. 2009. |
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[2] |
High performance computer simulations for the study of biological function in 3D heart models incorporating fibre orientation and realistic geometry at para−cellular resolution Rodriguez B Bernabeu MO Bishop MJ Pitt−Francis J Gavaghan DJ Grau V In Computers in Cardiology. 2008. |
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[3] |
Multi−scale computational modelling in biology and physiology. James Southern‚ Joe Pitt−Francis‚ Jonathan Whiteley‚ Daniel Stokeley‚ Hiromichi Kobashi‚ Ross Nobes‚ Yoshimasa Kadooka and David Gavaghan In Progress in Biophysics and Molecular Biology. Vol. 96. No. 1−3. Pages 60−89. 2008. |
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[4] |
Simulating cardiac electrophysiology using anisotropic mesh adaptivity J Pitt−Francis J Southern GJ Gorman MD Piggott PE Farrell MO Bernabeu In Journal of computational science. No. 1. Pages 82−88. 2010. |
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[5] |
Stimulus protocol determines the most computationally−efficient preconditioner for the bidomain equations D. Kay M. Bernabeu P. Pathmanathan J. Pitt−Francis In Transactions of Biomedical Engineering (in press). 2010. |
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[6] |
High−throughput cardiac science on the grid J. Pitt−Francis‚ B. Rodriguez and others In Phil. Trans. R. Soc. A. Pages 3907−3923. 2010. |
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[7] |
Chaste: A test−driven approach to software development for biological modelling J. Pitt−Francis‚ P. Pathmanathan‚ M.O. Bernabeu‚ R. Bordas‚ J. Cooper‚ A.G. Fletcher‚ G.R. Mirams‚ P. Murray‚ J.M. Osborne‚ A. Walter‚ S.J. Chapman‚ A. Garny‚ I.M.M. van Leeuwen‚ P.K. Maini‚ B. Rodriguez‚ S.L. Waters‚ J.P. Whiteley‚ H.M. Byrne and D.J. Gavaghan In Computer Physics Communications. Vol. 180. No. 12. Pages 2452−2471. 2009. |
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[8] |
A numerical guide to the solution of the bidomain equations of cardiac electrophysiology P. Pathmanathan‚ M.O. Bernabeu‚ R. Bordas‚ J. Cooper‚ A. Garny‚ J. Pitt−Francis‚ J.P. Whiteley and D.J. Gavaghan In Progress in Biophysics and Molecular Biology. Vol. 102. No. (2−3). Pages 136−155. 2010. |
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[9] |
Chaste: Using Agile Programming Techniques to Develop Computational Biology Software Joe Pitt−Francis‚ Miguel O. Bernabeu‚ Jonathan Cooper‚ Alan Garny‚ Lee Momtahan‚ James Osborne‚ Pras Pathmanathan‚ Blanca Rodriguez‚ Jonathan P. Whiteley and David J. Gavaghan In Philosophical Transactions of the Royal Society A. Vol. 366. No. 1878. Pages 3111−3136. 2008. |
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[10] |
A computational study of discrete mechanical tissue models P Pathmanathan‚ J Cooper‚ A Fletcher‚ G Mirams‚ P Murray‚ J Osborne‚ J Pitt−Francis‚ A Walter and S J Chapman In Physical Biology. Vol. 6. No. 3. 2009. |
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[11] |
Simulation of Cardiac Electrophysiology on Next−Generation High−Performance Computers Rafel Bordas‚ Bruno Carpentieri‚ Giorgio Fotia‚ Fabio Maggio‚ Ross Nobes‚ Joe Pitt−Francis and James Southern In Phil Trans Roy Soc (A). Vol. 367. No. 1895. Pages 1951−1969. 2009. |
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[12] |
An integrative computational model for intestinal tissue renewal HM Byrne IMM van Leeuwen GR Mirams A Walter A Fletcher P Murray J Osborne S Varma SJ Young J Cooper B Doyle J Pitt−Francis L Momtahan P Pathmanathan JP Whiteley SJ Chapman DJ Gavaghan OE Jensen JR King PK Maini SL Waters In Cell Proliferation. Vol. 42. Pages 617−636. 2009. |
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[13] |
Chaste: Incorporating a Novel Multiscale Spatial and Temporal Algorithm into a Large Scale Open Source Library M.O. Bernabeu‚ R. Bordas‚ P. Pathmanathan‚ J. Pitt−Francis‚ J. Cooper‚ A. Garny‚ D.J. Gavaghan‚ B. Rodriguez‚ J.A. Southern and J.P. Whiteley In Phil Trans Roy Soc (A). Vol. 367. No. 1895. Pages 1907−1930. May, 2009. |